Some Cool Test Workflow: Difference between revisions

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Latest revision as of 21:21, 7 February 2024

PID (if applicable): doi:10.1093/hmg/ddab299

Problem Statement

This is a test for the staging portal

Object of Research and Objective

Not much to do here

Procedure

RDMO to Portal

Involved Disciplines

Mathematical Areas:

1 - linear algebra

Non-Mathematical Disciplines:

1 - chemistry

Data Streams

data from chemistry to mathematics

Model

ID: mardi:Q28

logistic regression model

statistical model

Discretization

Time:
Space:

Variables

Name	Unit	Symbol

Parameters

Name	Unit	Symbol

Process Information

Process Steps

Name	Description	Input	Output	Method	Parameter	Environment	Mathematical Area

Applied Methods

ID	Name	Process Step	Parameter	implemented by

Software used

ID	Name	Description	Version	Programming Language	Dependencies	versioned	published	documented

Hardware

ID	Name	Processor	Compiler	#Nodes	#Cores

Input Data

ID	Name	Size	Data Structure	Format Representation	Format Exchange	binary/text	proprietary	to publish	to archive

Output Data

ID	Name	Size	Data Structure	Format Representation	Format Exchange	binary/text	proprietary	to publish	to archive

Reproducibility

Mathematical Reproducibility

Runtime Reproducibility

Reproducibility of Results

Reproducibility on original Hardware

Reproducibility on other Hardware

Transferability to

Legend

The following abbreviations are used in the document to indicate/resolve IDs:

doi: DOI / https://dx.doi.org/

sw: swMATH / https://swmath.org/software/

wikidata: https://www.wikidata.org/wiki/

mardi: https://portal.mardi4nfdi.de/wiki/

@@ Line 1: / Line 1: @@
+PID (if applicable): doi:[https://dx.doi.org/10.1093/hmg/ddab299 10.1093/hmg/ddab299]
+<span id="problem-statement"></span>
+== Problem Statement ==
+This is a test for the staging portal
+<span id="object-of-research-and-objective"></span>
+=== Object of Research and Objective ===
+Not much to do here
+<span id="procedure"></span>
+=== Procedure ===
+RDMO to Portal
+<span id="involved-disciplines"></span>
+=== Involved Disciplines ===
+<b>Mathematical Areas:</b>
+- [https://staging.mardi4nfdi.org/wiki/Item:Q30 linear algebra]
+<b>Non-Mathematical Disciplines:</b>
+- [https://staging.mardi4nfdi.org/wiki/Item:Q29 chemistry]
+<span id="data-streams"></span>
+=== Data Streams ===
+data from chemistry to mathematics
+<span id="model"></span>
+== Model ==
+ID: mardi:[https://staging.mardi4nfdi.org/wiki/Item:Q28 Q28]
+logistic regression model
+statistical model
+<span id="discretization"></span>
+=== Discretization ===
+* Time:
+* Space:
+<span id="variables"></span>
+=== Variables ===
+{| class="wikitable"
+! Name
+! Unit
+! Symbol
+|-
+|
+|
+|
+|}
+<span id="parameters"></span>
+=== Parameters ===
+{| class="wikitable"
+! Name
+! Unit
+! Symbol
+|-
+|
+|
+|
+|}
+<span id="process-information"></span>
+== Process Information ==
+<span id="process-steps"></span>
+=== Process Steps ===
+{| class="wikitable"
+!width="12%"| Name
+!width="12%"| Description
+!width="12%"| Input
+!width="12%"| Output
+!width="12%"| Method
+!width="12%"| Parameter
+!width="12%"| Environment
+!width="12%"| Mathematical Area
+|-
+|
+|
+|
+|
+|
+|
+|
+|
+|}
+<span id="applied-methods"></span>
+=== Applied Methods ===
+{| class="wikitable"
+! ID
+! Name
+! Process Step
+! Parameter
+! implemented by
+|-
+|
+|
+|
+|
+|
+|}
+<span id="software-used"></span>
+=== Software used ===
+{| class="wikitable"
+!width="11%"| ID
+!width="11%"| Name
+!width="11%"| Description
+!width="11%"| Version
+!width="11%"| Programming Language
+!width="11%"| Dependencies
+!width="11%"| versioned
+!width="11%"| published
+!width="11%"| documented
+|-
+|
+|
+|
+|
+|
+|
+|
+|
+|
+|}
+<span id="hardware"></span>
+=== Hardware ===
+{| class="wikitable"
+! ID
+! Name
+! Processor
+! Compiler
+! #Nodes
+! #Cores
+|-
+|
+|
+|
+|
+|
+|
+|}
+<span id="input-data"></span>
+=== Input Data ===
+{| class="wikitable"
+!width="10%"| ID
+!width="10%"| Name
+!width="10%"| Size
+!width="10%"| Data Structure
+!width="10%"| Format Representation
+!width="10%"| Format Exchange
+!width="10%"| binary/text
+!width="10%"| proprietary
+!width="10%"| to publish
+!width="10%"| to archive
+|-
+|
+|
+|
+|
+|
+|
+|
+|
+|
+|
+|}
+<span id="output-data"></span>
+=== Output Data ===
+{| class="wikitable"
+!width="10%"| ID
+!width="10%"| Name
+!width="10%"| Size
+!width="10%"| Data Structure
+!width="10%"| Format Representation
+!width="10%"| Format Exchange
+!width="10%"| binary/text
+!width="10%"| proprietary
+!width="10%"| to publish
+!width="10%"| to archive
+|-
+|
+|
+|
+|
+|
+|
+|
+|
+|
+|
+|}
+<span id="reproducibility"></span>
+== Reproducibility ==
+<span id="mathematical-reproducibility"></span>
+=== Mathematical Reproducibility ===
+<span id="runtime-reproducibility"></span>
+=== Runtime Reproducibility ===
+<span id="reproducibility-of-results"></span>
+=== Reproducibility of Results ===
+<span id="reproducibility-on-original-hardware"></span>
+=== Reproducibility on original Hardware ===
+<span id="reproducibility-on-other-hardware"></span>
+=== Reproducibility on other Hardware ===
+<span id="transferability-to"></span>
+=== Transferability to ===
+<span id="legend"></span>
+== Legend ==
+The following abbreviations are used in the document to indicate/resolve IDs:
+doi: DOI / https://dx.doi.org/
+sw: swMATH / https://swmath.org/software/
+wikidata: https://www.wikidata.org/wiki/
+mardi: https://portal.mardi4nfdi.de/wiki/