Code and data sets for "MS²Rescore: Data-driven rescoring dramatically boosts immunopeptide identification rates" (Q6800)

Code used to prepare data sets, train and evaluate new MSPIP models, evaluate MSRescore for immunopeptidomics, and generate figures.See README.md for more information on how to use these files and reproduce the results reported in the manuscript titled MSRescore: Data-driven rescoring dramatically boosts immunopeptide identification rates.